dcronkite 2163147063e Copy commit hash Added code lookup example closer to SAS code; included a note in the SAS code 14 Oct 2024 dcronkite 71f779c1a88 Copy commit hash Added instructions/link to using phenorm_predict code 14 Oct 2024 dcronkite db9b45b3f1d Copy commit hash Added anaphylaxis code lookup excel 14 Oct 2024 dcronkite 6708e50f1e6 Copy commit hash Fixed indentation 29 Aug 2024 dcronkite c7bff8702a5 Copy commit hash Fixed quotation marks 27 Aug 2024 dcronkite e5f6f29e8b3 Copy commit hash Fixed numbering 27 Aug 2024 dcronkite 1139e8a2cbc Copy commit hash Clarified what quick start is for 27 Aug 2024 dcronkite 3bb827f167e Copy commit hash Update README.md with correct link for R 16 Aug 2024 dcronkite dfa96792c1f Copy commit hash Created README.md defining the steps to run for SAS Phenorm 16 Aug 2024 dcronkite a669343c9bb Copy commit hash Improved quick start 16 Aug 2024 dcronkite 0407750ca1a Copy commit hash Added quickstart into the README 17 Jul 2024 dcronkite 1954e667c0d Copy commit hash Add references to SAS files 19 Jun 2024 Brian Williamson 4a611255aea M Copy commit hash Merge pull request #30 from bdwilliamson/main Remove columns with zero variability in 01_process_data 16 Feb 2024 Brian Williamson ebc07cc1b07 Copy commit hash Remove columns with zero variability in 01_process_data Removing columns with zero variability in 00_preprocess could work,
but may cause problems for external model evaluation. Removing
these columns only in the training data, during 01_process_data,
ensures that model training is based on only informative columns,
but that model evaluation can be based on columns that may have been
used at the external model development site. 16 Feb 2024 Brian Williamson d9a0dcc7388 M Copy commit hash Merge pull request #29 from bdwilliamson/main Add KPWA DI7 gold data analysis, capability for external model evaluation 14 Feb 2024 Brian Williamson 27a1466ab2b M Copy commit hash Merge branch 'kpwhri:master' into main 14 Feb 2024 Brian Williamson 025d6f47e28 Copy commit hash Add analysis with DI7 labels, capability for external model validation 14 Feb 2024 Arvind Ramaprasan 0ec92844035 Copy commit hash Add files via upload 29 Jan 2024 Arvind Ramaprasan 9189b584feb Copy commit hash Delete 05_Silver_Label_and_Analytic_File_for_BrianW.sas 29 Jan 2024 Arvind Ramaprasan e7d8a510e5b Copy commit hash Delete 04_Clinical_Text_For_NLP.sas 29 Jan 2024 Arvind Ramaprasan 099ee262680 Copy commit hash Delete 03_Clinical_Text_Measures.sas 29 Jan 2024 Arvind Ramaprasan aa972d3af2e Copy commit hash Delete 02_Pull_Note_Text_and_SM_Records.sas 29 Jan 2024 Arvind Ramaprasan 28442e2f5a6 Copy commit hash Delete 01_define_cohort_AR.sas 29 Jan 2024 Arvind Ramaprasan 62bd961061a M Copy commit hash Merge pull request #28 from kpwhri/Programming-Silver-Labels Add files via upload 29 Jan 2024 Arvind Ramaprasan 68b4349f81f Copy commit hash Add files via upload 29 Jan 2024 Arvind Ramaprasan d10b055894b Copy commit hash Delete Programming Silver Labels 29 Jan 2024 Arvind Ramaprasan ee7ec762cd5 Copy commit hash Create Programming Silver Labels 29 Jan 2024 Brian Williamson a5d20bff941 M Copy commit hash Merge pull request #27 from bdwilliamson/main Add tibble (for rowname_to_column) and pass weight_var, valid_label 29 Jan 2024 Brian Williamson 61f6a333c1e Copy commit hash Add tibble (for rowname_to_column) and pass weight_var, valid_label 29 Jan 2024 Brian Williamson b73eee74cf3 M Copy commit hash Merge pull request #26 from bdwilliamson/main Fix weighted AUC cis 19 Jan 2024 Brian Williamson cd544ff5ca0 Copy commit hash Fix weighted AUC cis 19 Jan 2024 Brian Williamson da5bc9850ff Copy commit hash Fix weighted AUC cis 19 Jan 2024 Brian Williamson ba6d81d2ffc M Copy commit hash Merge pull request #25 from bdwilliamson/main Fix AUC CIs, add for weighted analysis 17 Jan 2024 Brian Williamson 2c3282dd0f8 M Copy commit hash Merge branch 'kpwhri:master' into main 17 Jan 2024 Brian Williamson 7e88fd1d31c Copy commit hash Fix AUC CI computation 17 Jan 2024 Brian Williamson 95a8fc3ca0d M Copy commit hash Merge pull request #24 from bdwilliamson/main Add HOI 2.0 outcome for KPWA analysis 16 Jan 2024 Brian Williamson c9504977e27 M Copy commit hash Merge branch 'kpwhri:master' into main 16 Jan 2024 Brian Williamson bdeb4a40802 Copy commit hash Use HOI 2.0 outcome for scalable NLP anaphylaxis run 16 Jan 2024 Brian Williamson 55a6a6002ff M Copy commit hash Merge pull request #23 from kpwhri/main Merge changes from main 13 Dec 2023 Brian Williamson 8e2e754a2b4 M Copy commit hash Merge pull request #22 from bdwilliamson/main Fix merge conflicts 13 Dec 2023 Brian Williamson faec28b04ba M Copy commit hash Merge remote-tracking branch 'upstream/master' 13 Dec 2023 Brian Williamson 3795beef09d M Copy commit hash Merge pull request #20 from bdwilliamson/main Updates for anaphylaxis analysis 13 Dec 2023 Brian Williamson 8a4d832161a Copy commit hash Update required packages 13 Dec 2023 Brian Williamson ba60909f94c Copy commit hash Minor updates 05 Dec 2023 Brian Williamson fe0e799d9b6 Copy commit hash Bump up plot width more 05 Dec 2023 Brian Williamson 063f543f63e Copy commit hash Bump up plot width 05 Dec 2023 Brian Williamson 233731cbeb4 Copy commit hash Remove 'pred_prob_' prefix from hist titles 05 Dec 2023 Brian Williamson 28b4d8d3eda Copy commit hash Don't set explicit number of rows and cols 05 Dec 2023 Brian Williamson f9ed7ad94ab Copy commit hash Make plot a wrap, not grid 05 Dec 2023 Brian Williamson a1384215760 Copy commit hash Double width of histogram plot 05 Dec 2023 
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